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Structure & Deep Data of Ercalcitriol (C28H44O3)

Identification of Ercalcitriol Chemical Compound

2D chemical structure image of Ercalcitriol
Chemical Formula C28H44O3
Molecular Weight 428.64716 g/mol
IUPAC Name (1R,3S,5Z)-5-{2-[(1R,3aS,4E,7aR)-1-[(2R,3E,5S)-6-hydroxy-5,6-dimethylhept-3-en-2-yl]-7a-methyl-octahydro-1H-inden-4-ylidene]ethylidene}-4-methylidenecyclohexane-1,3-diol
SMILES String CC(C=CC(C)C(C)(C)O)C1CCC2C(CCCC12C)=CC=C3CC(O)CC(O)C3=C
InChI InChI=1S/C28H44O3/c1-18(9-10-19(2)27(4,5)31)24-13-14-25-21(8-7-15-28(24,25)6)11-12-22-16-23(29)17-26(30)20(22)3/h9-12,18-19,23-26,29-31H,3,7-8,13-17H2,1-2,4-6H3/b10-9+,21-11+,22-12-/t18-,19+,23-,24-,25+,26+,28-/m1/s1
InChIKey ZGLHBRQAEXKACO-XJRQOBMKSA-N

Chemical Structure Description

A chemical structure of a molecule includes the arrangement of atoms and the chemical bonds that hold the atoms together. The Ercalcitriol molecule contains a total of 77 bond(s). There are 33 non-H bond(s), 4 multiple bond(s), 5 rotatable bond(s), 4 double bond(s), 1 five-membered ring(s), 2 six-membered ring(s), 1 nine-membered ring(s), 3 hydroxyl group(s), 2 secondary alcohol(s), and 1 tertiary alcohol(s). Images of the chemical structure of Ercalcitriol are given below:

2D chemical structure image of Ercalcitriol
2-dimensional (2D) chemical structure image of Ercalcitriol
3D chemical structure image of Ercalcitriol
3-dimensional (3D) chemical structure image of Ercalcitriol

The 2D chemical structure image of Ercalcitriol is also called skeletal formula, which is the standard notation for organic molecules. The carbon atoms in the chemical structure of Ercalcitriol are implied to be located at the corner(s) and hydrogen atoms attached to carbon atoms are not indicated – each carbon atom is considered to be associated with enough hydrogen atoms to provide the carbon atom with four bonds.

The 3D chemical structure image of Ercalcitriol is based on the ball-and-stick model which displays both the three-dimensional position of the atoms and the bonds between them. The radius of the spheres is therefore smaller than the rod lengths in order to provide a clearer view of the atoms and bonds throughout the chemical structure model of Ercalcitriol. Download structure data file (SDF/MOL) file of this compound.


Interactive 3D Visualization

For a better understanding of the chemical structure, an interactive 3D visualization of Ercalcitriol is provided here.

The Ercalcitriol molecule shown in the visualization screen can be rotated interactively by keep clicking and moving the mouse button. Mouse wheel zoom is available as well – the size of the Ercalcitriol molecule can be increased or decreased by scrolling the mouse wheel.

The information of the atoms, bonds, connectivity and coordinates included in the chemical structure of Ercalcitriol can easily be identified by this visualization. By right-clicking the visualization screen, various other options are available including the visualization of van der Waals surface and exporting to an image file.


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Additional Information for Identifying Ercalcitriol Molecule

  • SMILES (Simplified Molecular-Input Line-Entry System) string of Ercalcitriol

    The SMILES string of Ercalcitriol is CC(C=CC(C)C(C)(C)O)C1CCC2C(CCCC12C)=CC=C3CC(O)CC(O)C3=C, which can be can be imported by most molecule editors for conversion back into two-dimensional drawings or three-dimensional models of the Ercalcitriol.

  • Structure Data File (SDF/MOL File) of Ercalcitriol

    The structure data file (SDF/MOL File) of Ercalcitriol is available for download in the SDF page of Ercalcitriol, which provides the information about the atoms, bonds, connectivity and coordinates of Ercalcitriol. The Ercalcitriol structure data file can be imported to most of the cheminformatics software systems and applications.

  • Chemical formula of Ercalcitriol

    The molecular formula of Ercalcitriol is available in chemical formula page of Ercalcitriol, which identifies each constituent element by its chemical symbol and indicates the proportionate number of atoms of each element.

  • Molecular weight of Ercalcitriol

    The molecular weight of Ercalcitriol is available in molecular weight page of Ercalcitriol, which is calculated as the sum of the atomic weights of each constituent element multiplied by the number of atoms of that element in the molecular formula.

  • Other names (synonyms) or registry numbers of Ercalcitriol

    The Ercalcitriol compound may be called differently depending on the various different situations of industrial applications. Below are the list of the other names (synonyms) of Ercalcitriol including the various registry numbers, if available:

    • Ercalcitriol|1?,25-Dihydroxyvitamin D2|(1R,3S,5Z)-4-Methylene-5-[(2E)-2-[(1R,3aS,7aR)-octahydro-1-[(1R,2E)-5-hydroxy-1,4,5-trimethyl-2-hexen-1-yl]-7?-methyl-4H-inden-4-ylidene]ethylidene]-1,3-cyclohexanediol
    • (1R,3S,5Z)-4-Methylene-5-[(2E)-2-[(1R,3aS,7aR)-octahydro-1-[(1R,2E)-5-hydroxy-1,4,5-trimethyl-2-hexen-1-yl]-7a-methyl-4H-inden-4-ylidene]ethylidene]-1,3-cyclohexanediol
    • 1alpha,25-Dihydroxyvitamin D2, >=97.0% (sum of vitamin and previtamin, HPLC)
    • (1|A,3|A,5Z,7E,22E)-9,10-Secoergosta-5,7,10(19),22-tetraene-1,3,25-triol
    • 1,3-Cyclohexanediol, 4-methylene-5-((2E)-2-((1R,3aS,7aR)-octahydro-1-((1R,2E)-5-hydroxy-1,4,5-trimethyl-2-hexen-1-yl)-7a-methyl-4H-inden-4-ylidene)ethylidene)-, (1R,3S,5Z)-
    • 9,10-Secoergosta-5,7,10(19),22-tetraene-1,3,25-triol, (1alpha,3beta,5Z,7E,22E)-
    • LMST03010040
    • 8962AB
    • 1 25-DIHYDROXYVITAMIND2*
    • HMDB06225
    • 1|A,25-Dihydroxy Vitamin D2
    • 1-alpha,25-Dihydroxycalciferol
    • 1a,25-Dihydroxyergocalciferol
    • 1a,25-Dihydroxyvitamin D2
    • 1,25-Dihydroxy vitamin D
    • 1a,25-Dihydroxycalciferol
    • RO-17-6218
    • MFCD00869499
    • 1|A,25-Dihydroxyvitamin D2
    • (5Z,7E,22E)-(1S,3R)-9,10-seco-5,7,10(19),22-ergostatetraene-1,3,25-triol
    • 1alpha,25-dihydroxyvitamin D2 / 1alpha,,25-dihydroxyergocalciferol
    • Ro 17-6218
    • 5RWP08OQ36
    • 1alpha,25-Dihydroxycalciferol
    • 1alpha,25-dihydroxyergocalciferol
    • 60133-18-8
    • 1,25-Dihydroxyvitamin D2
    • 1,25-Dihydroxycalciferol
    • 1alpha,25-Dihydroxyvitamin D2
    • 1,25-Dihydroxyergocalciferol
    • Ercalcitriol
    • W-5175

Ercalcitriol Identification Summary Frequently Asked Questions (FAQs)

What’s the chemical formula of Ercalcitriol?
C28H44O3
How many atoms and what are the elements included the Ercalcitriol molecule?
75 atom(s) - 44 Hydrogen atom(s), 28 Carbon atom(s), and 3 Oxygen atom(s)
How many chemical bonds and what kind of bonds are included the Ercalcitriol structure?
77 bond(s) - 33 non-H bond(s), 4 multiple bond(s), 5 rotatable bond(s), 4 double bond(s), 1 five-membered ring(s), 2 six-membered ring(s), 1 nine-membered ring(s), 3 hydroxyl group(s), 2 secondary alcohol(s), and 1 tertiary alcohol(s)
What’s the Ercalcitriol’s molecular weight?
428.64716 g/mol
What’s the SMILES code of Ercalcitriol?
CC(C=CC(C)C(C)(C)O)C1CCC2C(CCCC12C)=CC=C3CC(O)CC(O)C3=C
What’s the InChI string of Ercalcitriol?
InChI=1S/C28H44O3/c1-18(9-10-19(2)27(4,5)31)24-13-14-25-21(8-7-15-28(24,25)6)11-12-22-16-23(29)17-26(30)20(22)3/h9-12,18-19,23-26,29-31H,3,7-8,13-17H2,1-2,4-6H3/b10-9+,21-11+,22-12-/t18-,19+,23-,24-,25+,26+,28-/m1/s1
What’s the InChIKey code of Ercalcitriol?
ZGLHBRQAEXKACO-XJRQOBMKSA-N

35 The contents of this page can freely be shared if cited as follows:
Source: Chemical Compounds Deep Data Source (CCDDS; https://www.molinstincts.com) based on 41 patented QSQN and QN technology
commercialized into Mol-Instincts database and ChemRTP, ChemEssen, Inc (2024).

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